Every few years 23andMe changes their chip, and with it many of the SNPs that they sequence. Whenever this happens we gain access to a host of new and potentially useful SNPs. However we also sometimes lose access to useful SNPs that are part of our reports. In the the case of the new V5 chip, based on comparisons we’ve run from a few reference genomes that members of our community have generously given us permission to look at, there are several hundred SNPs that we look for on our reports (of the more than 1,600 that we look for) that will no longer be available. This is unfortunate, however there are alternatives and research has already begun to see how many of the new SNPs added in V5 we can bring to our reports. Below you can see a collection of SNPs that we believe may no longer be available in 23andMe’s V5 chip, and whether or not they are available through AncestryDNA. We must stress that this list is not definitive and is not based on any special access we have to either 23andMe or AncestryDNA
SNP | 23andMe V5 | Ancestry DNA |
---|---|---|
A2M A9242623T | ||
AANAT C10236T | ||
ABCA2 T15891C | ||
ABCG2 126555G>C | ||
ABP1 M479I | ||
ABP1/DAO S332P | ||
ACAT1 G22670A | ||
ADA C10783T | ||
ADA G22021A | ||
ADAM12 G63103C | ||
ADK G509567T | ||
AGT 11216C>T | ||
AGT 11623G>A | ||
AGT 11780A>G | ||
AGT 13828T>C | ||
AGT 5319G>A | ||
AGT 5451A>C | ||
AGT 5978A>G | ||
AGT Leu244Arg | ||
AGXT2 A35035579G | ||
AGXT2 H118H | ||
AGXT2 V498L | ||
AGXT2L1 S127P | ||
AHCY-01 G14905A | ||
ALDH2 C23443T | ||
ALDH2 C36438A | ||
ALDH2 T29504C | ||
ALDH3A2 C13996T | ||
ANK3 C666301A | ||
ANK3 G658454A | ||
ANK3 T197902C | ||
APBB2 G41002946C | ||
APOE A178G | ||
APOE C8002T | ||
APOE G455A | ||
APP Ala655Thr | ||
APP Ala674Gly | ||
APP Glu647Asp | ||
ATP5g3 Ile65Val | ||
ATP6V1B1 11708C>T | ||
ATP8A2 (ATP) A7430564G | ||
ATP8A2 (ATP) G7279179A | ||
ATP8A2 (ATP) T7520642C | ||
BCKDHA C5472T | ||
BCKDHB C229524T | ||
BCMO1 36464T>C | ||
BHMT A7961G | ||
BHMT-08 C6457T | ||
BMP2 C282Y | ||
CAT A12175G | ||
CAT C14185T | ||
CAT C21068T | ||
CAT T5070C | ||
CBS A360A | ||
CBS C*351T | ||
CBS G*299A | ||
CBS T*330C | ||
CD14 140634318C>T | ||
CNR1 A88858521T | ||
CNR1 A88861698G | ||
CNR1 A88864653G | ||
CNR1 C88856331T | ||
CNR1 C88864063T | ||
CNR1 G88871049A | ||
CNR1 T88851181C | ||
CNR1 T88856178C | ||
CNR1 T88861570C | ||
CNR1 T88867925C | ||
CNR2 G155G | ||
CNR2 G24215130A | ||
CNR2 G63A | ||
CNR2 T24221834G | ||
COMT A7406G | ||
COMT C28914T | ||
COMT G28299A | ||
COMT T26501G | ||
COMT/TXNRD2 C4622T | ||
COX5A 74933074G>A | ||
CTH A11886G | ||
CTH A32114G | ||
CTH G25229T | ||
CTH G6010A | ||
CTH S4031I | ||
CTH T16147C | ||
CTH T8763C | ||
CYBRD1 171546027C>A | ||
CYBRD1 171546859G>A | ||
CYP1A1*2C A4889G | ||
CYP1B1 10233C>T | ||
CYP1B1 A119S | ||
CYP1B1 N453S | ||
CYP1B1 R48G | ||
CYP2A6*2 A1799T | ||
CYP2B6 A136G | ||
CYP2B6 Q172H | ||
CYP2B6 R487C | ||
CYP2C19 C1418T | ||
CYP2C19 C5709T | ||
CYP2C19_80161G>A V331I | ||
CYP2C19*2B G276A | ||
CYP2C19*7 T24294A | ||
CYP2C19*9 G17784A | ||
CYP2C9 C334T | ||
CYP2C9 G9806A | ||
CYP2C9 T2674C | ||
CYP2C9*8 449G>A | ||
CYP2D6 C186G | ||
CYP2D6 C2850T | ||
CYP2D6 G2908A | ||
CYP2D6 G7754A | ||
CYP2D6 T100C | ||
CYP2D6 T130G | ||
CYP2D6*14 1758G>A | ||
CYP2D6*17 T107I | ||
CYP2D6*2 S486T | ||
CYP2D6*4 1846G>A | ||
CYP2E1 A46G | ||
CYP2E1 G3378C | ||
CYP2E1 T8845C | ||
CYP2E1*7_-352A>G A352G | ||
CYP2E1*7_-71G>T G71T | ||
CYP3A4*4 I118V | ||
DAO A14747C | ||
DAO A24464G | ||
DAO G8864A | ||
DBH C12828T | ||
DBH C18813T | ||
DBH G12174A | ||
DBH G952T | ||
DBH T13150C | ||
DBH T16031C | ||
DBH T2145C | ||
DBH T8114C | ||
DBH T9160C | ||
DBT A56731G | ||
DBT G384S | ||
DDC A19551G | ||
DDC A85104G | ||
DDC G108706C | ||
DDC G15443T | ||
DDC G196757C | ||
DDC T94092G | ||
DDO A110735630G | ||
DDR2 A162603881G | ||
DDR2 A162613975G | ||
DDR2 A162619362C | ||
DDR2 C162619828T | ||
DDR2 G162635875A | ||
DDR2 T162648343C | ||
DDR2 T162661011G | ||
DDR2 T162681151G | ||
DISC1 C14853T | ||
DLD T19214C | ||
DLST G24147A | ||
DMGDH G67591T | ||
DMGDH T835C | ||
DRD2 A32594G | ||
DRD2 A33029G | ||
DRD2 A37613G | ||
DRD2 A61820G | ||
DRD2 A9611G | ||
DRD2 C31550T | ||
DRD2 C33935T | ||
DRD2 C36639T | ||
DRD2 C41383T | ||
DRD2 C71572T | ||
DRD2 C72519G | ||
DRD2 G26528A | ||
DRD2 G52663A | ||
DRD2 G54383A | ||
DRD2 T21228G | ||
DRD3 C40013T | ||
DRD3 G17248T | ||
DRD3 T21277C | ||
DRD3 T27841C | ||
DRD3 T29528C | ||
DRD4 C4710T | ||
DRD4 C8887A | ||
DRD4 T4095C | ||
DRD4 T581G | ||
DTNBP1 C11202T | ||
F10 113777509 A5397C | ||
F7 A353G Arg329Gln | ||
FBP1 T97390288C | ||
FOLR1 G-20A | ||
FOXE1 5378A>G | ||
FOXE1 8124G>A | ||
G6PD A*357G | ||
G6PD A153760508G | ||
G6PD G9437T | ||
G6PD Q402Q | ||
GAD1 (GAD) C14541T | ||
GAD1 (GAD) C2627A | ||
GAD1 (GAD) G25509C | ||
GAD1 (GAD) G39901A | ||
GAD1 (GAD) G3992T | ||
GAD1 (GAD) G5276A | ||
GAD1 (GAD) T21922C | ||
GAD1 (GAD) T30473C | ||
GAD2 (GAD) A26505496G | ||
GAMT C9110T | ||
GAMT G7497A | ||
GART A9979G | ||
GCH1 161G>T | ||
GCH1 A14340G | ||
GCH1 A14404T | ||
GCH1 A30528G | ||
GCH1 A53980G | ||
GCH1 C12707T | ||
GCH1 C15878T | ||
GCH1 C36378991T | ||
GCH1 C37668A | ||
GCH1 G19512A | ||
GCH1 G55306457C | ||
GCH1 G62974A | ||
GGH C15472T | ||
GGH G13894A | ||
GGT1 C17146T | ||
GLDC A55715G | ||
GSS A18836C | ||
GSS A5997G | ||
GSS G11705T | ||
GSTM1 7730C>T | ||
H6PD C9329289T | ||
H6PD G9321241A | ||
H6PD G9323910A | ||
HAO1 A7873112G | ||
HAO1 A7905050G | ||
HAO1 G7905283A | ||
HAO1 T7894092C | ||
HAO1 T7905947C | ||
HDC T10086C | ||
HEPH 57825T>G | ||
HEPH 6731C>T | ||
HEPH Ala598Thr | ||
HFE 193A>T | ||
HFE 6382T>G | ||
HFE 8828T>C | ||
HFE S65C | ||
HLA-A 7727C>G | ||
HLA-C 7911A>G | ||
HLA-DOA 7989C>A | ||
HLA-DQA2 4157371A>C | ||
HLA-DRA 6694C>T | ||
HLA-DRA 9003G>A | ||
HLA-G 9048C>G | ||
HMOX1 11354A>G | ||
HMOX1 11558G>A | ||
HMOX1 14814A>G | ||
HMOX1 5559G>A | ||
HMOX2 187879C>T | ||
HNMT A47507G | ||
HRH4 G*2144A | ||
HRH4 T3537649C | ||
IDE G91606A | ||
IL4R Q576R Gln576Arg | ||
IL5 A131879916G | ||
KLC1 C.*396G | ||
LDHD C75150275T | ||
LIAS A19410C | ||
LIAS C16647T | ||
LRP6 Cys1270 | ||
LRP6 V1062I | ||
MAOA A16535C | ||
MAOA A85020G | ||
MAOA C42794T | ||
MAOA G3638A | ||
MAOA R297R/G492T/T941G | ||
MAOA T1011C/1460C | ||
MAOA T89113C | ||
MAOB A118723G | ||
MAT1A C1131T | ||
MAT1A C15656T | ||
MPO A15067C | ||
MPO C7900T | ||
MTHFD1L A33780G | ||
MTHFD1L G71171A | ||
MTHFD2 C8503T | ||
MTHFR 03 P39P | ||
MTHFR A*372C | ||
MTHFR A4117C | ||
MTHFR C-137T | ||
MTHFR C10318T | ||
MTHFR C24909T | ||
MTHFS – ST20 MTHFS G56057A | ||
MTR A*153G | ||
MTR A50417C | ||
MTR A68550G | ||
MTR C62048T | ||
MTR G106853T | ||
MTR G34783A | ||
MTR G35489C | ||
MTR G94982A | ||
MTR T9195C | ||
MTRR -11 A664A | ||
MTRR A22893G | ||
MTRR C32295T | ||
MTRR G*541A | ||
MTRR G1155A | ||
MTRR G12099A | ||
MTRR T*662A | ||
MTRR T12072C | ||
MTRR T16071C | ||
MUT T24234C | ||
NDUFAB1 A23601488G | ||
NDUFS3 9866G>A | ||
NDUFS7 5808G>A | ||
NDUFS7 Ala204Ser | ||
NDUFS7 Pro23Leu | ||
NDUFS8 2592C>T | ||
NDUFS8 6843T>C | ||
NLRP1 7466T>A | ||
NLRP3 247617036G>T | ||
NLRP3 247622357A>G | ||
NOD2 19150C>T | ||
NOD2 Gly881Arg | ||
NOD2 L1007P | ||
NOS1 A57373G | ||
NOS1 T2202C | ||
NOS2 T32235C | ||
NOS2 T836165G | ||
NOS3 A6251T | ||
NOS3 C19635T | ||
NQO1 G13070C | ||
NQO1 G13161A | ||
NQO1 G13528A | ||
NQO1 T6314C | ||
NQO1 T7706C | ||
OLR1 T17500A | ||
PAH A259T | ||
PAH A27743C | ||
PAH A55562G | ||
PAH C35625G | ||
PAH C45188T | ||
PAH C5594T | ||
PAH C81837T | ||
PAH G*187A | ||
PAH G1155C | ||
PAH G735A | ||
PAH IVS7+1G>A | ||
PAH T17864C | ||
PAH T31338A | ||
PAH T32409C | ||
PEMT T17020543A | ||
PGM1 A64069612G | ||
PGM1 A64125439C | ||
PGM1 G64085337A | ||
PGM1 T64108771C | ||
PHACTR1 12822973A>C | ||
PHACTR1 12848969T>G | ||
PHACTR1 12961220A>G | ||
PHACTR1 13137765G>T | ||
PHACTR1 13268211A>G | ||
PNMT A456G | ||
PRPS2 G12839152A | ||
PSEN1 T66540C | ||
PSEN2 Ser130Leu | ||
RAD50 89512C>T | ||
RBKS C28038080T | ||
RBKS G28019175A | ||
RFC1 C39300198T | ||
RFC1 G39308187A | ||
RFC1 T39367654C | ||
RNF219 T79207588C | ||
SERPINC1 G5301A | ||
SLC19A1 A429V | ||
SLC19A1 A518V | ||
SLC19A1 G14094A | ||
SLC19A1 T32525G | ||
SLC19A2 A23663G | ||
SLC19A3 L252L | ||
SLC40A1 190431875C>A | ||
SLC40A1 190444392T>C | ||
SLC6A2 A40223G | ||
SLC6A2 C28547T | ||
SLC6A2 C35917A | ||
SLC6A2 C41517T | ||
SLC6A2 C45295T | ||
SLC6A2 C48079T | ||
SLC6A2 C51371T | ||
SLC6A2 G13486A | ||
SLC6A2 G32299A | ||
SLC6A2 G47034T | ||
SLC6A2 T32009C | ||
SLC6A2 T49018G | ||
SLC6A3 C51747T | ||
SLC6A3 C7345T | ||
SLC6A3 G37899A | ||
SLC6A3 G48964A | ||
SLC6A3 G55467A | ||
SLC6A3 T12190G | ||
SLC6A3 T26639C | ||
SLC6A3 T55729C | ||
SOCS-1 -820G>T 11256298C>A | ||
SOD2 406+816G>T | ||
SORL1 A123560G | ||
SORL1 G106922A | ||
SORL1 G108082A | ||
SORL1 G130294A | ||
SORL1 G146128A | ||
SORL1 T121434428C | ||
SPR 7413A>G | ||
STAT4 51047C>G | ||
STEAP3 10971G>T | ||
STEAP3 8350G>A | ||
SULT2A1 A20117G | ||
SULT2A1 G17136A | ||
SULT2A1 G781A | ||
SULT2A1 G9696A | ||
SUOX C5444T | ||
TALDO1 C749776T | ||
TCN2 C766G | ||
TF 24212C>T | ||
TF 25478A>G | ||
TF 35041T>C | ||
TF 6398A>G | ||
TF 6612A>G | ||
TF 7720C>T | ||
TFAM Ser12Thr | ||
TFRC 195776976T>C | ||
TFRC 195798258T>C | ||
TFRC Gly142Ser | ||
TH A733C | ||
TH G1010A//R337H | ||
TH T1090C | ||
TH V112M | ||
TPK1 C364824T | ||
TTR Gly26Ser | ||
TYR (MeFV) V726A Cys55Ser | ||
UGT1A1 G182349A | ||
UQCRC2 26102G>T | ||
VDR A48244184C | ||
VDR C18167A | ||
VDR C48238068A | ||
VDR C48239675T | ||
VDR C48245T | ||
VDR C48287373A | ||
VDR C48296268T | ||
VDR C59232T | ||
VDR C65594A | ||
VDR Fok | ||
VDR G14442A | ||
VDR G48251542A | ||
VDR G48273714A | ||
VDR G48285414A | ||
VDR G48286015A | ||
VDR G48288246A | ||
VDR G48293716T | ||
VDR G48294131A | ||
VDR S198S | ||
VDR T34405C | ||
VDR T38809C | ||
VDR T412I | ||
VDR T416T | ||
VDR T47866G | ||
VDR T48255411C | ||
VDR T48272275C | ||
VDR T50459C | ||
VDR T7329C | ||
WDTC1 (ADP) C27583993T | ||
WWC1 G179644A |
As you can see, a good alternative to 23andMe’s service is Ancestry DNA. Normal pricing for Ancestry DNA is only $99 and has been on sale for as low as $69. Their current v2 chip will at this time give you a more complete Variant Report than 23andMe’s V5 chip. Additionally there are a wide range of genetic apps and services online that are also compatible with Ancestry DNA’s format, including ours.